$ sh ./installxSDK.sh =============================================================================== Configuring xSDK to compile on your system =============================================================================== =============================================================================== Trying to download git://https://bitbucket.org/petsc/pkg-sowing.git for SOWING =============================================================================== =============================================================================== Running configure on SOWING; this may take several minutes =============================================================================== =============================================================================== Running make on SOWING; this may take several minutes =============================================================================== =============================================================================== Running make install on SOWING; this may take several minutes =============================================================================== =============================================================================== Trying to download http://downloads.sourceforge.net/project/boost/boost/1.60.0/boost_1_60_0.tar.gz for BOOST =============================================================================== =============================================================================== Building and installing boost, this may take many minutes =============================================================================== =============================================================================== Trying to download http://www.hdfgroup.org/ftp/HDF5/prev-releases/hdf5-1.8.12/src/hdf5-1.8.12.tar.gz for HDF5 =============================================================================== =============================================================================== Running configure on HDF5; this may take several minutes =============================================================================== =============================================================================== Running make on HDF5; this may take several minutes =============================================================================== =============================================================================== Running make install on HDF5; this may take several minutes =============================================================================== =============================================================================== Trying to download ftp://ftp.unidata.ucar.edu/pub/netcdf/netcdf-4.3.2.tar.gz for NETCDF =============================================================================== =============================================================================== Trying to download http://ftp.mcs.anl.gov/pub/petsc/externalpackages/netcdf-4.3.2.tar.gz for NETCDF =============================================================================== =============================================================================== Running configure on NETCDF; this may take several minutes =============================================================================== =============================================================================== Running make on NETCDF; this may take several minutes =============================================================================== =============================================================================== Running make install on NETCDF; this may take several minutes =============================================================================== =============================================================================== Trying to download git://https://github.com/LLNL/hypre for HYPRE =============================================================================== =============================================================================== Running configure on HYPRE; this may take several minutes =============================================================================== =============================================================================== Running make on HYPRE; this may take several minutes =============================================================================== =============================================================================== Running make install on HYPRE; this may take several minutes =============================================================================== =============================================================================== Trying to download http://ftp.mcs.anl.gov/pub/petsc/externalpackages/metis-5.1.0-p3.tar.gz for METIS =============================================================================== =============================================================================== Configuring METIS with cmake, this may take several minutes =============================================================================== =============================================================================== Compiling and installing METIS; this may take several minutes =============================================================================== =============================================================================== Trying to download http://ftp.mcs.anl.gov/pub/petsc/externalpackages/parmetis-4.0.3-p3.tar.gz for PARMETIS =============================================================================== =============================================================================== Configuring PARMETIS with cmake, this may take several minutes =============================================================================== =============================================================================== Compiling and installing PARMETIS; this may take several minutes =============================================================================== =============================================================================== Trying to download http://crd-legacy.lbl.gov/~xiaoye/SuperLU/superlu_dist_5.0.0.tar.gz for SUPERLU_DIST =============================================================================== =============================================================================== Configuring SUPERLU_DIST with cmake, this may take several minutes =============================================================================== =============================================================================== Compiling and installing SUPERLU_DIST; this may take several minutes =============================================================================== =============================================================================== Trying to download git://https://github.com/trilinos/trilinos for TRILINOS =============================================================================== =============================================================================== Configuring TRILINOS with cmake, this may take several minutes =============================================================================== =============================================================================== Compiling and installing TRILINOS; this may take several minutes =============================================================================== =============================================================================== Trying to download git://https://github.com/trilinos/xSDKTrilinos.git for XSDKTRILINOS =============================================================================== =============================================================================== Compiling PETSc; this may take several minutes =============================================================================== =============================================================================== Testing PETSc; this may take several minutes =============================================================================== =============================================================================== Configuring XSDKTRILINOS with cmake, this may take several minutes =============================================================================== =============================================================================== Compiling and installing XSDKTRILINOS; this may take several minutes =============================================================================== =============================================================================== Testing xSDKTrilinos; this may take several minutes =============================================================================== Compilers: C Compiler: mpicc -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fvisibility=hidden -g3 C++ Compiler: mpicxx -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fvisibility=hidden -g -fPIC -std=c++11 Fortran Compiler: mpif90 -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g Linkers: Shared linker: mpicc -shared -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fvisibility=hidden -g3 Dynamic linker: mpicc -shared -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fvisibility=hidden -g3 MPI: Includes: -I/usr/include/mpich2 make: BLAS/LAPACK: -llapack -lblas cmake: Arch: hwloc: Library: -lhwloc hdf5: Includes: -I/sandbox/bsmith/petsc/arch-xsdk/include Library: -Wl,-rpath,/sandbox/bsmith/petsc/arch-xsdk/lib -L/sandbox/bsmith/petsc/arch-xsdk/lib -lhdf5hl_fortran -lhdf5_fortran -lhdf5_hl -lhdf5 parmetis: Includes: -I/sandbox/bsmith/petsc/arch-xsdk/include Library: -Wl,-rpath,/sandbox/bsmith/petsc/arch-xsdk/lib -L/sandbox/bsmith/petsc/arch-xsdk/lib -lparmetis metis: Includes: -I/sandbox/bsmith/petsc/arch-xsdk/include Library: -Wl,-rpath,/sandbox/bsmith/petsc/arch-xsdk/lib -L/sandbox/bsmith/petsc/arch-xsdk/lib -lmetis SuperLU_DIST: Includes: -I/sandbox/bsmith/petsc/arch-xsdk/include Library: -Wl,-rpath,/sandbox/bsmith/petsc/arch-xsdk/lib -L/sandbox/bsmith/petsc/arch-xsdk/lib -lsuperlu_dist hypre: Includes: -I/sandbox/bsmith/petsc/arch-xsdk/include Library: -Wl,-rpath,/sandbox/bsmith/petsc/arch-xsdk/lib -L/sandbox/bsmith/petsc/arch-xsdk/lib -lHYPRE -Wl,-rpath,/nfs/software/linux-ubuntu_precise_amd64/apps/packages/gcc-4.9.0/lib/gcc/x86_64-unknown-linux-gnu/4.9.0 -L/nfs/software/linux-ubuntu_precise_amd64/apps/packages/gcc-4.9.0/lib/gcc/x86_64-unknown-linux-gnu/4.9.0 -Wl,-rpath,/nfs/software/linux-ubuntu_precise_amd64/apps/packages/gcc-4.9.0/lib/gcc -L/nfs/software/linux-ubuntu_precise_amd64/apps/packages/gcc-4.9.0/lib/gcc -Wl,-rpath,/nfs/software/linux-ubuntu_precise_amd64/apps/packages/gcc-4.9.0/lib64 -L/nfs/software/linux-ubuntu_precise_amd64/apps/packages/gcc-4.9.0/lib64 -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/nfs/software/linux-ubuntu_precise_amd64/apps/packages/gcc-4.9.0/lib -L/nfs/software/linux-ubuntu_precise_amd64/apps/packages/gcc-4.9.0/lib -lmpichcxx -lstdc++ netcdf: Includes: -I/sandbox/bsmith/petsc/arch-xsdk/include Library: -Wl,-rpath,/sandbox/bsmith/petsc/arch-xsdk/lib -L/sandbox/bsmith/petsc/arch-xsdk/lib -lnetcdf boost: Includes: -I/sandbox/bsmith/petsc/arch-xsdk/include X: Library: -lX11 Trilinos: Includes: -I/sandbox/bsmith/petsc/arch-xsdk/include Library: -Wl,-rpath,/sandbox/bsmith/petsc/arch-xsdk/lib -L/sandbox/bsmith/petsc/arch-xsdk/lib -lpike-blackbox -ltrilinoscouplings -lpanzer-disc-fe -lpanzer-dof-mgr -lpanzer-core -lpanzer-disc-fe -lpanzer-dof-mgr -lpanzer-core -lpiro -lrol -lstokhos_muelu -lstokhos_ifpack2 -lstokhos_amesos2 -lstokhos_tpetra -lstokhos_sacado -lstokhos -lrythmos -lmuelu-adapters -lmuelu-interface -lmuelu -llocathyra -llocaepetra -llocalapack -lloca -lnoxepetra -lnoxlapack -lnox -lphalanx -lintrepid2 -lintrepid -lteko -lstratimikos -lstratimikosbelos -lstratimikosaztecoo -lstratimikosamesos -lstratimikosml -lstratimikosifpack -lifpack2-adapters -lifpack2 -lanasazitpetra -lModeLaplace -lanasaziepetra -lanasazi -lmapvarlib -lfastqlib -lblotlib -lplt -lsvdi_cgi -lsvdi_cdr -lsuplib -lsupes -laprepro_lib -lchaco -lIonit -lIotr -lIohb -lIogn -lIopg -lIoexo_fac -lIopx -lIofx -lIoex -lIoss -lnemesis -lexodus_for -lexodus -lmapvarlib -lfastqlib -lblotlib -lplt -lsvdi_cgi -lsvdi_cdr -lsuplib -lsupes -laprepro_lib -lchaco -lIonit -lIotr -lIohb -lIogn -lIopg -lIoexo_fac -lIopx -lIofx -lIoex -lIoss -lnemesis -lexodus_for -lexodus -lamesos2 -lshylu -lbelostpetra -lbelosepetra -lbelos -lml -lifpack -lzoltan2 -lpamgen_extras -lpamgen -lamesos -lgaleri-xpetra -lgaleri-epetra -laztecoo -lisorropia -loptipack -lxpetra-sup -lxpetra -lthyratpetra -lthyraepetraext -lthyraepetra -lthyracore -lthyratpetra -lthyraepetraext -lthyraepetra -lthyracore -lepetraext -ltpetraext -ltpetrainout -ltpetra -lkokkostsqr -ltpetrakernels -ltpetraclassiclinalg -ltpetraclassicnodeapi -ltpetraclassic -ltpetraext -ltpetrainout -ltpetra -lkokkostsqr -ltpetrakernels -ltpetraclassiclinalg -ltpetraclassicnodeapi -ltpetraclassic -ltriutils -lglobipack -lshards -lzoltan -lepetra -lsacado -lrtop -lteuchoskokkoscomm -lteuchoskokkoscompat -lteuchosremainder -lteuchosnumerics -lteuchoscomm -lteuchosparameterlist -lteuchoscore -lteuchoskokkoscomm -lteuchoskokkoscompat -lteuchosremainder -lteuchosnumerics -lteuchoscomm -lteuchosparameterlist -lteuchoscore -lkokkosalgorithms -lkokkoscontainers -lkokkoscore -lkokkosalgorithms -lkokkoscontainers -lkokkoscore -lpthread valgrind: ssl: Library: -lssl -lcrypto pthread: sowing: xSDKTrilinos: Includes: -I/sandbox/bsmith/petsc/arch-xsdk/include Library: -Wl,-rpath,/sandbox/bsmith/petsc/arch-xsdk/lib -L/sandbox/bsmith/petsc/arch-xsdk/lib -lxsdktrilinos PETSc: PETSC_ARCH: arch-xsdk PETSC_DIR: /sandbox/bsmith/petsc Scalar type: real Precision: double Clanguage: C shared libraries: enabled Integer size: 32 Memory alignment: 16 xxx=========================================================================xxx Installation complete. You do not need to run make to compile or install the software xxx=========================================================================xxx